TAP CCAAT_HAP2 (NF-YA) in Setaria viridis

Full lineage¹: click here to see lineage

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

CBFB_NFYA
bZIP_1
bZIP_2

(Domain names are clickable)



List of proteins (9)

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namename additionClick button to show/hide sequence: Download sequence?
Sevir.1G344700.1.ppacid=32666155 transcript=Sevir.1G344700.1 locus=Sevir.1G344700 ID=Sevir.1G344700.1.v1.1 annot-version=v1.1
Sevir.2G041900.1.ppacid=32638939 transcript=Sevir.2G041900.1 locus=Sevir.2G041900 ID=Sevir.2G041900.1.v1.1 annot-version=v1.1
Sevir.2G394300.1.ppacid=32640634 transcript=Sevir.2G394300.1 locus=Sevir.2G394300 ID=Sevir.2G394300.1.v1.1 annot-version=v1.1
Sevir.3G407100.1.ppacid=32676830 transcript=Sevir.3G407100.1 locus=Sevir.3G407100 ID=Sevir.3G407100.1.v1.1 annot-version=v1.1
Sevir.3G413100.1.ppacid=32675672 transcript=Sevir.3G413100.1 locus=Sevir.3G413100 ID=Sevir.3G413100.1.v1.1 annot-version=v1.1
Sevir.9G128500.1.ppacid=32654147 transcript=Sevir.9G128500.1 locus=Sevir.9G128500 ID=Sevir.9G128500.1.v1.1 annot-version=v1.1
Sevir.9G154600.1.ppacid=32652686 transcript=Sevir.9G154600.1 locus=Sevir.9G154600 ID=Sevir.9G154600.1.v1.1 annot-version=v1.1
Sevir.9G372900.1.ppacid=32649688 transcript=Sevir.9G372900.1 locus=Sevir.9G372900 ID=Sevir.9G372900.1.v1.1 annot-version=v1.1
Sevir.9G525800.1.ppacid=32655321 transcript=Sevir.9G525800.1 locus=Sevir.9G525800 ID=Sevir.9G525800.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum